MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6022_ses-2_T1w.
  • Date and time: 2022-11-11, 17:34.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.4566757294254262
cnr2.7596857559451364
efc0.5600260386678935
fber1076.6984889510002
fwhmavg3.88571
fwhmx3.83204
fwhmy4.38121
fwhmz3.44388
icvscsf0.21439969118144972
icvsgm0.4180247021831406
icvswm0.3675756066354097
inumed1.5398510694503784
inurange0.527421486377716
qi10.0
qi20.005260611945827699
rpvecsf34.81377841297006
rpvegm18.254168206299617
rpvewm24.431820311634763
sizex176
sizey256
sizez256
snrcsf3.2049633983488373
snrgm11.31485737655194
snrtotal11.910471477284814
snrwm21.21159365695366
snrdcsf30.301984087828977
snrdgm69.35273914302059
snrdtotal63.225636650348044
snrdwm90.02218672019458
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk27.763091842682787
summarybgmad7.277499060823391
summarybgmean18.561372785951907
summarybgmedian17.772511895745993
summarybgn2410747.0
summarybgp057.729632157832384
summarybgp9532.94967284798622
summarybgstdv8.01514640991364
summarycsfk29.378165010352667
summarycsfmad86.07524751249736
summarycsfmean360.7056169378574
summarycsfmedian336.6057332381606
summarycsfn18717.0
summarycsfp05237.51974786892532
summarycsfp95561.5662393674255
summarycsfstdv105.0235835182065
summarygmk0.1528959471659883
summarygmmad64.36822445176551
summarygmmean771.6519655077398
summarygmmedian770.3960751760751
summarygmn8936.0
summarygmp05659.2050344822928
summarygmp95890.0925322771072
summarygmstdv68.08331223429299
summarywmk0.9556915264875614
summarywmmad40.486316614235875
summarywmmean996.2949627452947
summarywmmedian1000.0000026673079
summarywmn141253.0
summarywmp05907.8650441728532
summarywmp951066.542544031888
summarywmstdv47.14386288393672
tpmoverlapcsf0.1650555431842804
tpmoverlapgm0.44094377756118774
tpmoverlapwm0.4891314208507538
wm2max0.813929846310071
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime15:54:43.870000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.00323627, 0.977879, 0.209144, 0.0907305, 0.207996, -0.973913]
ImageOrientationTextSag>Tra(-5.1)>Cor(1.3)
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0386155
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2
SeriesNumber112
ShimSetting[2639, 5455, -7478, 213, -116, -965, 17, -190]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp219.548
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum023709cad64e85c958dcb78587ca6b10
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.